MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-277-P3

Family name MIR-277 (all species)
Seed AAAUGCA
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-277-P4  Lan-Mir-277-P5 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) L. anatina
Node of Origin (family) Protostomia
Genome context
(LinAna_1.0)		 LFEI01002950: 1521-1587 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACCAGCAGUCUAACAUUAUCCAUGCCCAGAAUAUACCAGUAGUGCAUCCUACAUGUGACUGUUGCUAUGGUGUAAAUGCAUUAUCUGGUAUAUGACUGGUCCUGGAUACAUACAGCAGAGGUUACC
Get precursor sequence
Structure
        10         20        30         40         50        60   
UACCAGCAGUCUAACAU-      UGC    A-         -|       CC    UGUGACUG 
                  UAUCCA   CCAG  AUAUACCAG UAGUGCAU  UACA        \
                  AUAGGU   GGUC  UAUAUGGUC AUUACGUA  AUGU        U
CCAUUGGAGACGACAUAC      CCU    AG         U^       A-    GGUAUCGU 
     120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To To
Star sequence

Lan-Mir-277-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAUAUACCAGUAGUGCAUCCUACA -24
Get sequence
Mature sequence

Lan-Mir-277-P3_3p
mirBase accessionNone
Sequence 
43- UAAAUGCAUUAUCUGGUAUAUGAC -67
Get sequence