MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-203-P1-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-203-P1-v2  Mal-Mir-203-P2-v1  Mal-Mir-203-P2-v2 
Orthologues Dre-Mir-203-P1-v1  Dre-Mir-203-P1-v2  Gmo-Mir-203-P1-v1  Gmo-Mir-203-P1-v2  Lch-Mir-203  Pma-Mir-203-o1  Spt-Mir-203 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV885305.1: 49124-49184 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGUAGACGCAACUGAUCCUCUUUGGUCCAGUGGUUCUAGACAGUUCAACAGUAGUGAGUCCACCUUUGUGAAAUGUUUAGGACCACUUGAUCAGAGCGAAGGAACUGGCAUCUGGGAAG
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Structure
        10           20        30        40        50        60
CCGGUAGACGCAACUGA---| CU        C              G    A  GUAGUGA 
                    UC  CUUUGGUC AGUGGUUCUAGACA UUCA CA       G
                    AG  GAGACUAG UCACCAGGAUUUGU AAGU GU       U
GAAGGGUCUACGGUCAAGGA^ C-        U              A    -  UUCCACC 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-203-P1-v1_5p*

mirBase accessionNone
Sequence
0- AGUGGUUCUAGACAGUUCAACA -22
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Mature sequence

Mal-Mir-203-P1-v1_3p

mirBase accessionNone
Sequence
39- GUGAAAUGUUUAGGACCACUUG -61
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