MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-203-P2-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-203-P1-v1  Mal-Mir-203-P1-v2  Mal-Mir-203-P2-v1 
Orthologues Dre-Mir-203-P2-v1  Dre-Mir-203-P2-v2  Gmo-Mir-203-P2-v1  Gmo-Mir-203-P2-v2  Lch-Mir-203  Pma-Mir-203-o2-v1  Pma-Mir-203-o2-v2  Spt-Mir-203  Tni-Mir-203-P2-v1  Tni-Mir-203-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884701.1: 1040824-1040885 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUAGAAGAAGUGCCUAGUCUCGCUGAUUAAGUGGUUCUUAACAGUUCAACAGUUCUUUGACAAAAUUGUGAAAUGUUUAGGACCACUUGACCAGUCAGACAAAUGCUGCCAGCUUUUGAA
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Structure
        10          20        30        40        50        60 
GCCUAGAAGAAGUGCCUA--|   C    A            U    G    A  GUUCUUU 
                    GUCU GCUG UUAAGUGGUUCU AACA UUCA CA       \
                    CAGA UGAC AGUUCACCAGGA UUGU AAGU GU       G
AAGUUUUCGACCGUCGUAAA^   C    C            U    A    -  UAAAACA 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-203-P2-v2_5p* (predicted)

mirBase accessionNone
Sequence
0- AAGUGGUUCUUAACAGUUCAACA -23
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Mature sequence

Mal-Mir-203-P2-v2_3p

mirBase accessionNone
Sequence
40- UGAAAUGUUUAGGACCACUUGA -62
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