MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-203-P2-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-203a
Paralogues Dre-Mir-203-P1-v1  Dre-Mir-203-P1-v2  Dre-Mir-203-P2-v2 
Orthologues Gmo-Mir-203-P2-v1  Gmo-Mir-203-P2-v2  Lch-Mir-203  Mal-Mir-203-P2-v1  Mal-Mir-203-P2-v2  Pma-Mir-203-o2-v1  Pma-Mir-203-o2-v2  Spt-Mir-203  Tni-Mir-203-P2-v1  Tni-Mir-203-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr17: 45808184-45808243 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-P2-v1)		 Mir-203-P2-v1 chr17: 45808184-45808243 [+] UCSC Ensembl
Mir-203-P2-v2 chr17: 45808184-45808243 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUUGGGUCUCUUCUGGUCCCUCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUAUCUCAAAAUUGUGAAAUGUUUAGGACCACUUGACCAGAGUGACACUGUCUCUGAUUCUCAGA
Get precursor sequence
Structure
        10          20        30        40        50          
UGUUUGGGUCUCUUCUG--|  C       GC         U    G    A  GUUCUAU 
                   GUC CUCUGGU  AGUGGUUCU AACA UUCA CA       \
                   CAG GAGACCA  UCACCAGGA UUGU AAGU GU       C
AGACUCUUAGUCUCUGUCA^  U       GU         U    A    -  UAAAACU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-203-P2-v1_5p*
mirBase accessionMIMAT0031923
Sequence 
0- AGUGGUUCUUAACAGUUCAACA -22
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Mature sequence

Dre-Mir-203-P2-v1_3p
mirBase accessionMIMAT0001278
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
Get sequence
Proposed targets TargetScanFish: dre-miR-203a