MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-203-P2-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-203
Paralogues Tni-Mir-203-P2-v2 
Orthologues Dre-Mir-203-P2-v1  Dre-Mir-203-P2-v2  Gmo-Mir-203-P2-v1  Gmo-Mir-203-P2-v2  Lch-Mir-203  Mal-Mir-203-P2-v1  Mal-Mir-203-P2-v2  Pma-Mir-203-o2-v1  Pma-Mir-203-o2-v2  Spt-Mir-203 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 105176090-105176149 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-P2-v1)		 Mir-203-P2-v2 Un_random: 105176089-105176150 [+] UCSC Ensembl
Mir-203-P2-v1 Un_random: 105176090-105176149 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAGACGAAAGAGUGAGGUCUCUCUGAUUAAGUGGUUCUCAACAGUUCAACAGUUCUUUGAGAAAAUUGUGAAAUGUUUAGGACCACUUGACCAGUCAGACAAAUGCUGUCGACUUGGGG
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Structure
        10          20        30        40        50          
AGAGACGAAAGAGUGAG--|   CU   A            C    G    A  GUUCUUU 
                   GUCU  CUG UUAAGUGGUUCU AACA UUCA CA       \
                   CAGA  GAC AGUUCACCAGGA UUGU AAGU GU       G
GGGGUUCAGCUGUCGUAAA^   CU   C            U    A    -  UAAAAGA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-203-P2-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUCAACAGUUCAACA -22
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Mature sequence

Tni-Mir-203-P2-v1_3p
mirBase accessionMIMAT0003076
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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