MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-203-P1-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-203-P1-v1  Mal-Mir-203-P2-v1  Mal-Mir-203-P2-v2 
Orthologues Dre-Mir-203-P1-v1  Dre-Mir-203-P1-v2  Gmo-Mir-203-P1-v1  Gmo-Mir-203-P1-v2  Lch-Mir-203  Pma-Mir-203-o1  Spt-Mir-203 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV885305.1: 49123-49185 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCGGUAGACGCAACUGAUCCUCUUUGGUCCAGUGGUUCUAGACAGUUCAACAGUAGUGAGUCCACCUUUGUGAAAUGUUUAGGACCACUUGAUCAGAGCGAAGGAACUGGCAUCUGGGAAGC
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Structure
        10        20           30        40        50        60 
CCCGGUAGACGCAACUGAU   ---|       C              G    A  GUAGUGA 
                   CCU   CUUUGGUC AGUGGUUCUAGACA UUCA CA       G
                   GGA   GAGACUAG UCACCAGGAUUUGU AAGU GU       U
CGAAGGGUCUACGGUCAA-   AGC^       U              A    -  UUCCACC 
 120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-203-P1-v2_5p* (predicted)

mirBase accessionNone
Sequence
0- CAGUGGUUCUAGACAGUUCAACA -23
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Mature sequence

Mal-Mir-203-P1-v2_3p

mirBase accessionNone
Sequence
41- UGAAAUGUUUAGGACCACUUGA -63
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