MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-203-o1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-203a
Paralogues Pma-Mir-203-o2-v1  Pma-Mir-203-o2-v2  Pma-Mir-203-o3-v1  Pma-Mir-203-o3-v2 
Orthologues Dre-Mir-203-P1-v1  Dre-Mir-203-P1-v2  Gmo-Mir-203-P1-v1  Gmo-Mir-203-P1-v2  Lch-Mir-203  Mal-Mir-203-P1-v1  Mal-Mir-203-P1-v2  Spt-Mir-203 
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046101.1: 7616657-7616716 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACGAGGACCAAGUCUCUGCUUCCCGGGCCCAGUGGUUCUCAUCAGUUCAACAGUUCUUUGGAGAAAUUGUGAAAUGUUUAGGACCACUGGGACCGGAGGGGCCUCUCCGUCAAAGCCAAG
Get precursor sequence
Structure
        10         20         30        40        50          
ACGAGGACCAAGUCUCU-     -|   G            CAU  G    A   UUCUUU 
                  GCUUC CCGG CCCAGUGGUUCU   CA UUCA CAG      \
                  CGGGG GGCC GGGUCACCAGGA   GU AAGU GUU      G
GAACCGAAACUGCCUCUC     A^   A            UUU  A    -   AAAGAG 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-203-o1_5p*
mirBase accessionMIMAT0019511
Sequence 
0- AGUGGUUCUCAUCAGUUCAACAG -23
Get sequence
Mature sequence

Pma-Mir-203-o1_3p
mirBase accessionMIMAT0019512
Sequence 
38- GUGAAAUGUUUAGGACCACUGG -60
Get sequence