| MirGeneDB ID | Mal-Mir-214-P2-v1 |
|---|
| Family name |
MIR-214 (all species) |
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| Seed |
CAGCAGG |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
Mal-Mir-214-P1-v1
Mal-Mir-214-P1-v2
Mal-Mir-214-P2-v2
|
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| Orthologues |
Cja-Mir-214
Gmo-Mir-214-P2-v1
Gmo-Mir-214-P2-v2
Laf-Mir-214
Lch-Mir-214
Mun-Mir-214
Pab-Mir-214
Spt-Mir-214
Tni-Mir-214-P2-v1
Tni-Mir-214-P2-v2
|
|---|
| Node of Origin (locus) |
Clupeocephala
|
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| Node of Origin (family) |
Gnathostomata
|
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884892.1: 232785-232847 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACCAACUGGCUGAAAGAGUUGCAGUGUGUCCGCCUAUCUCCACUUGCUGUGCAGAAUAUCCUCCAACCUGUACAGCAGGCACAGACAGGCAGAUAGACAACAGCCCGCCAAAUAAGCCAGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACCAACUGGCUGAAAGA--| CA G C A CCA AGAAUAUC
GUUG GU UGUC GCCU UCU CUUGCUGUGC \
CGAC CA AUAG CGGA AGA GGACGACAUG C
GACGACCGAAUAAACCGCC^ AA G A C CAC UCCAACCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Mal-Mir-214-P2-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGCCUAUCUCCACUUGCUGUGC -22
Get sequence
|
|---|
| Mature sequence |
Mal-Mir-214-P2-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- ACAGCAGGCACAGACAGGCAGA -63
Get sequence
|
|---|
