MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-214-P2-v1

Family name MIR-214 (all species)
Seed CAGCAGG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-214-P1-v1  Mal-Mir-214-P1-v2  Mal-Mir-214-P2-v2 
Orthologues Gmo-Mir-214-P2-v1  Gmo-Mir-214-P2-v2  Lch-Mir-214  Mun-Mir-214  Spt-Mir-214  Tni-Mir-214-P2-v1  Tni-Mir-214-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884892.1: 232785-232847 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAACUGGCUGAAAGAGUUGCAGUGUGUCCGCCUAUCUCCACUUGCUGUGCAGAAUAUCCUCCAACCUGUACAGCAGGCACAGACAGGCAGAUAGACAACAGCCCGCCAAAUAAGCCAGCAG
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Structure
        10          20        30        40        50        60 
ACCAACUGGCUGAAAGA--|   CA  G    C    A   CCA          AGAAUAUC 
                   GUUG  GU UGUC GCCU UCU   CUUGCUGUGC        \
                   CGAC  CA AUAG CGGA AGA   GGACGACAUG        C
GACGACCGAAUAAACCGCC^   AA  G    A    C   CAC          UCCAACCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-214-P2-v1_5p*

mirBase accessionNone
Sequence
0- CGCCUAUCUCCACUUGCUGUGC -22
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Mature sequence

Mal-Mir-214-P2-v1_3p

mirBase accessionNone
Sequence
41- ACAGCAGGCACAGACAGGCAGA -63
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