MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-214-P1-v1

Family name MIR-214 (all species)
Seed GCCUGUC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-214-P1-v2  Mal-Mir-214-P2-v1  Mal-Mir-214-P2-v2 
Orthologues Cja-Mir-214  Dre-Mir-214-P1-v1  Dre-Mir-214-P1-v2  Gmo-Mir-214-P1  Laf-Mir-214  Lch-Mir-214  Mun-Mir-214  Pab-Mir-214  Spt-Mir-214  Tni-Mir-214-P1-v1  Tni-Mir-214-P1-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884749.1: 81837-81897 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGAUAGGAUAAGACUGUUGUGGUGUGUCUGCCUGUCUACACUUGCUGUGCAGACCUUCUGCUCCUGUACAGCAGGCACAGACAGGCAGACAGAUGGCAGCCCCACUGACAUCAAAACAG
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Structure
        10          20        30        40        50          
UGUGAUAGGAUAAGACU--|    G  G             ACA          AGACCUU 
                   GUUGU GU UGUCUGCCUGUCU   CUUGCUGUGC       \
                   CGACG UA ACAGACGGACAGA   GGACGACAUG       C
GACAAAACUACAGUCACCC^    G  G             CAC          UCCUCGU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-214-P1-v1_5p

mirBase accessionNone
Sequence
0- UGCCUGUCUACACUUGCUGUGC -22
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Co-mature sequence

Mal-Mir-214-P1-v1_3p

mirBase accessionNone
Sequence
39- ACAGCAGGCACAGACAGGCAGA -61
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