MirGeneDB 3.0

MirGeneDB ID

Mal-Mir-214-P2-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-214-P1-v1  Mal-Mir-214-P1-v2  Mal-Mir-214-P2-v1 
Orthologues Cja-Mir-214  Gmo-Mir-214-P2-v1  Gmo-Mir-214-P2-v2  Laf-Mir-214  Lch-Mir-214  Mun-Mir-214  Pab-Mir-214  Spt-Mir-214  Tni-Mir-214-P2-v1  Tni-Mir-214-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884892.1: 232786-232846 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAACUGGCUGAAAGAGUUGCAGUGUGUCCGCCUAUCUCCACUUGCUGUGCAGAAUAUCCUCCAACCUGUACAGCAGGCACAGACAGGCAGAUAGACAACAGCCCGCCAAAUAAGCCAGCA
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Structure
        10        20          30        40        50          
CCAACUGGCUGAAAGAGUUGCA--| G    C    A   CCA           GAAUAUC 
                        GU UGUC GCCU UCU   CUUGCUGUGCA       \
                        CA AUAG CGGA AGA   GGACGACAUGU       C
ACGACCGAAUAAACCGCCCGACAA^ G    A    C   CAC           CCAACCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-214-P2-v2_5p*

mirBase accessionNone
Sequence
0- GCCUAUCUCCACUUGCUGUGCA -22
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Mature sequence

Mal-Mir-214-P2-v2_3p

mirBase accessionNone
Sequence
39- UACAGCAGGCACAGACAGGCAG -61
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