MirGeneDB ID | Mal-Mir-214-P2-v2 |
Family name |
MIR-214 (all species) |
Seed |
ACAGCAG |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
Mal-Mir-214-P1-v1
Mal-Mir-214-P1-v2
Mal-Mir-214-P2-v1
|
Orthologues |
Cja-Mir-214
Gmo-Mir-214-P2-v1
Gmo-Mir-214-P2-v2
Laf-Mir-214
Lch-Mir-214
Mun-Mir-214
Pab-Mir-214
Spt-Mir-214
Tni-Mir-214-P2-v1
Tni-Mir-214-P2-v2
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Gnathostomata
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884892.1: 232786-232846 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCAACUGGCUGAAAGAGUUGCAGUGUGUCCGCCUAUCUCCACUUGCUGUGCAGAAUAUCCUCCAACCUGUACAGCAGGCACAGACAGGCAGAUAGACAACAGCCCGCCAAAUAAGCCAGCA
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|
Structure | 10 20 30 40 50
CCAACUGGCUGAAAGAGUUGCA--| G C A CCA GAAUAUC
GU UGUC GCCU UCU CUUGCUGUGCA \
CA AUAG CGGA AGA GGACGACAUGU C
ACGACCGAAUAAACCGCCCGACAA^ G A C CAC CCAACCU
. 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mal-Mir-214-P2-v2_5p* |
mirBase accession | None |
Sequence |
0- GCCUAUCUCCACUUGCUGUGCA -22
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|
Mature sequence |
Mal-Mir-214-P2-v2_3p |
mirBase accession | None |
Sequence |
39- UACAGCAGGCACAGACAGGCAG -61
Get sequence
|