MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-214

Family name MIR-214 (all species)
Seed ACAGCAG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-214-v1  Aca-Mir-214-v2  Ami-Mir-214-v1  Ami-Mir-214-v2  Bta-Mir-214-v1  Bta-Mir-214-v2  Cfa-Mir-214-v1  Cfa-Mir-214-v2  Cli-Mir-214-v1  Cli-Mir-214-v2  Cmi-Mir-214-v1  Cmi-Mir-214-v2  Cpi-Mir-214-v1  Cpi-Mir-214-v2  Cpo-Mir-214-v1  Cpo-Mir-214-v2  Dno-Mir-214-v1  Dno-Mir-214-v2  Dre-Mir-214-P1-v1  Dre-Mir-214-P1-v2  Eca-Mir-214-v1  Eca-Mir-214-v2  Ete-Mir-214-v1  Ete-Mir-214-v2  Gga-Mir-214-v1  Gga-Mir-214-v2  Gja-Mir-214-v1  Gja-Mir-214-v2  Gmo-Mir-214-P1  Gmo-Mir-214-P2-v1  Gmo-Mir-214-P2-v2  Hsa-Mir-214-v1  Hsa-Mir-214-v2  Laf-Mir-214  Lch-Mir-214  Loc-Mir-214-v1  Loc-Mir-214-v2  Mal-Mir-214-P1-v1  Mal-Mir-214-P1-v2  Mal-Mir-214-P2-v1  Mal-Mir-214-P2-v2  Mdo-Mir-214-v1  Mdo-Mir-214-v2  Mml-Mir-214-v1  Mml-Mir-214-v2  Mmr-Mir-214-v1  Mmr-Mir-214-v2  Mmu-Mir-214-v1  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v1  Oan-Mir-214-v2  Ocu-Mir-214-v1  Ocu-Mir-214-v2  Pab-Mir-214  Pbv-Mir-214-v1  Pbv-Mir-214-v2  Rno-Mir-214-v1  Rno-Mir-214-v2  Sha-Mir-214-v1  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v1  Sto-Mir-214-v2  Tgu-Mir-214-v1  Tgu-Mir-214-v2  Tni-Mir-214-P1-v1  Tni-Mir-214-P1-v2  Tni-Mir-214-P2-v1  Tni-Mir-214-P2-v2  Xla-Mir-214-P3-v1  Xla-Mir-214-P3-v2  Xla-Mir-214-P4-v1  Xla-Mir-214-P4-v2  Xtr-Mir-214-v1  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021932.1: 24129074-24129136 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCUGGCUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAAUGACAACCA
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Structure
        10          20        30        40        50        60 
GGGCCUGGCUGGACAGA--|          U          ACA           GAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGCA       \
                   CAACAGUACAC GACGGACAGA   GGACGACAUGU       C
ACCAACAGUAAGUCCGACC^          U          CAC           CCACUCG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-214_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Cja-Mir-214_3p
mirBase accessionNone
Sequence 
40- UACAGCAGGCACAGACAGGCAGU -63
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