MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-214-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-214-v1 
Orthologues Aca-Mir-214-v2  Ami-Mir-214-v2  Bta-Mir-214-v2  Cfa-Mir-214-v2  Cja-Mir-214  Cli-Mir-214-v2  Cmi-Mir-214-v2  Cpi-Mir-214-v2  Cpo-Mir-214-v2  Dno-Mir-214-v2  Eca-Mir-214-v2  Ete-Mir-214-v2  Gga-Mir-214-v2  Hsa-Mir-214-v2  Laf-Mir-214  Lch-Mir-214  Loc-Mir-214-v2  Mdo-Mir-214-v2  Mml-Mir-214-v2  Mmr-Mir-214-v2  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v2  Ocu-Mir-214-v2  Pab-Mir-214  Pbv-Mir-214-v2  Rno-Mir-214-v2  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v2  Tgu-Mir-214-v2  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015163693.1: 17069-17131 [-]
Precursor
(pre-Mir +30nt flank)
GGGGCUGGCUGGACAGAGUUGUCACGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAGAGACCACCA
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Structure
        10          20        30        40        50        60 
GGGGCUGGCUGGACAGA--|      C   U          ACA           GAACAUC 
                   GUUGUCA GUG CUGCCUGUCU   CUUGCUGUGCA       \
                   CAACAGU CAC GACGGACAGA   GGACGACAUGU       C
ACCACCAGAGAGUCCGACC^      A   U          CAC           CCACUCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Gja-Mir-214-v2_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Gja-Mir-214-v2_3p
mirBase accessionNone
Sequence 
40- UACAGCAGGCACAGACAGGCAGU -63
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