MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-214-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-214-v1 
Orthologues Aca-Mir-214-v2  Ami-Mir-214-v2  Bta-Mir-214-v2  Cfa-Mir-214-v2  Cli-Mir-214-v2  Cpi-Mir-214-v2  Cpo-Mir-214-v2  Dno-Mir-214-v2  Ete-Mir-214-v2  Gga-Mir-214-v2  Gja-Mir-214-v2  Hsa-Mir-214-v2  Lch-Mir-214  Loc-Mir-214-v2  Mdo-Mir-214-v2  Mml-Mir-214-v2  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v2  Ocu-Mir-214-v2  Pbv-Mir-214-v2  Rno-Mir-214-v2  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v2  Tgu-Mir-214-v2  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635895.1: 3665469-3665531 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCAAUGGCUGGAUGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAAAAUCCACUCACCUGUACAGCAGGCACAGACAGGCAGUCGCAUGACAACCCAGCCUGACUGACAGCCA
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Structure
        10          20        30        40        50        60 
CGCAAUGGCUGGAUGGA--|          U          ACA           GAAAAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGCA       \
                   CAACAGUACGC GACGGACAGA   GGACGACAUGU       C
ACCGACAGUCAGUCCGACC^          U          CAC           CCACUCA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Mir-214-v2_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Cmi-Mir-214-v2_3p
mirBase accessionNone
Sequence 
40- UACAGCAGGCACAGACAGGCAGU -63
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