MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-214-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-214-v1 
Orthologues Aca-Mir-214-v2  Ami-Mir-214-v2  Bta-Mir-214-v2  Cfa-Mir-214-v2  Cja-Mir-214  Cli-Mir-214-v2  Cmi-Mir-214-v2  Cpi-Mir-214-v2  Cpo-Mir-214-v2  Dno-Mir-214-v2  Eca-Mir-214-v2  Ete-Mir-214-v2  Gga-Mir-214-v2  Gja-Mir-214-v2  Hsa-Mir-214-v2  Laf-Mir-214  Lch-Mir-214  Mdo-Mir-214-v2  Mml-Mir-214-v2  Mmr-Mir-214-v2  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v2  Ocu-Mir-214-v2  Pab-Mir-214  Pbv-Mir-214-v2  Rno-Mir-214-v2  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v2  Tgu-Mir-214-v2  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(LepOcu1)		 LG10: 26287907-26287968 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCAUUGGCUGAGGGAGUUGUCGUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACUUCCUGCACCUGUACAGCAGGCACAGACAGGCAGACAGACGGCAGCCCACCGGACAGACAGACAU
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Structure
        10          20        30        40        50        60
UGCCAUUGGCUGAGGGA--|       G             ACA           GAACUU 
                   GUUGUCGU UGUCUGCCUGUCU   CUUGCUGUGCA      C
                   CGACGGCA ACAGACGGACAGA   GGACGACAUGU      C
UACAGACAGACAGGCCACC^       G             CAC           CCACGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-214-v2_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Loc-Mir-214-v2_3p
mirBase accessionNone
Sequence 
39- UACAGCAGGCACAGACAGGCAGA -62
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