MirGeneDB ID | Sto-Mir-214-v2 |
Family name |
MIR-214 (all species) |
Seed |
ACAGCAG |
Species |
Cloudy Catshark (Scyliorhinus torazame) |
MiRBase ID |
|
Paralogues |
Sto-Mir-214-v1
|
Orthologues |
Aca-Mir-214-v2
Ami-Mir-214-v2
Bta-Mir-214-v2
Cfa-Mir-214-v2
Cja-Mir-214
Cli-Mir-214-v2
Cmi-Mir-214-v2
Cpi-Mir-214-v2
Cpo-Mir-214-v2
Dno-Mir-214-v2
Eca-Mir-214-v2
Ete-Mir-214-v2
Gga-Mir-214-v2
Gja-Mir-214-v2
Hsa-Mir-214-v2
Laf-Mir-214
Lch-Mir-214
Loc-Mir-214-v2
Mdo-Mir-214-v2
Mml-Mir-214-v2
Mmr-Mir-214-v2
Mmu-Mir-214-v2
Mun-Mir-214
Oan-Mir-214-v2
Ocu-Mir-214-v2
Pab-Mir-214
Pbv-Mir-214-v2
Rno-Mir-214-v2
Sha-Mir-214-v2
Spt-Mir-214
Tgu-Mir-214-v2
Xtr-Mir-214-v2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (GCA_003427355_STO_add) |
BFAA01007060.1: 140614-140676 [+]
|
Precursor (pre-Mir +30nt flank) |
AGCAGUGGCUGGUAGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAAAAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGACUGACAGCCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGCAGUGGCUGGUAGGA--| U ACA GAAAAUC
GUUGUCAUGUG CUGCCUGUCU CUUGCUGUGCA \
CAACAGUACAC GACGGACAGA GGACGACAUGU C
ACCGACAGUCAGUCCGACC^ U CAC CCACUCU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Sto-Mir-214-v2_5p* |
mirBase accession | None |
Sequence |
0- UGCCUGUCUACACUUGCUGUGCA -23
Get sequence
|
Mature sequence |
Sto-Mir-214-v2_3p |
mirBase accession | None |
Sequence |
40- UACAGCAGGCACAGACAGGCAGU -63
Get sequence
|