MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-214-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-214
Paralogues Pbv-Mir-214-v1 
Orthologues Aca-Mir-214-v2  Ami-Mir-214-v2  Bta-Mir-214-v2  Cfa-Mir-214-v2  Cli-Mir-214-v2  Cmi-Mir-214-v2  Cpi-Mir-214-v2  Cpo-Mir-214-v2  Dno-Mir-214-v2  Ete-Mir-214-v2  Gga-Mir-214-v2  Gja-Mir-214-v2  Hsa-Mir-214-v2  Lch-Mir-214  Loc-Mir-214-v2  Mdo-Mir-214-v2  Mml-Mir-214-v2  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v2  Ocu-Mir-214-v2  Rno-Mir-214-v2  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v2  Tgu-Mir-214-v2  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE960262.1: 19350-19412 [+]
Clustered miRNAs
(< 50kb from Mir-214-v2)
Mir-199-P1-v1 KE960262.1: 14393-14453 [+]
Mir-199-P1-v2 KE960262.1: 14393-14453 [+]
Mir-199-P1-v3 KE960262.1: 14393-14453 [+]
Mir-214-v1 KE960262.1: 19350-19412 [+]
Mir-214-v2 KE960262.1: 19350-19412 [+]
Precursor
(pre-Mir +30nt flank)
UGGGCUGGCUGGAUAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAAUCCAGCCUGAAAGACAACCA
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Structure
        10          20        30        40        50        60 
UGGGCUGGCUGGAUAGA--|          U          ACA           GAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGCA       \
                   UAACAGUACAC GACGGACAGA   GGACGACAUGU       C
ACCAACAGAAAGUCCGACC^          U          CAC           CCACUCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Pbv-Mir-214-v2_5p*

mirBase accessionMIMAT0039018
Sequence
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Pbv-Mir-214-v2_3p

mirBase accessionMIMAT0039019
Sequence
40- UACAGCAGGCACAGACAGGCAGU -63
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