MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-214-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-214
Paralogues Rno-Mir-214-v1 
Orthologues Aca-Mir-214-v2  Ami-Mir-214-v2  Bta-Mir-214-v2  Cfa-Mir-214-v2  Cja-Mir-214  Cli-Mir-214-v2  Cmi-Mir-214-v2  Cpi-Mir-214-v2  Cpo-Mir-214-v2  Dno-Mir-214-v2  Eca-Mir-214-v2  Ete-Mir-214-v2  Gga-Mir-214-v2  Gja-Mir-214-v2  Hsa-Mir-214-v2  Laf-Mir-214  Lch-Mir-214  Loc-Mir-214-v2  Mdo-Mir-214-v2  Mml-Mir-214-v2  Mmr-Mir-214-v2  Mmu-Mir-214-v2  Mun-Mir-214  Oan-Mir-214-v2  Ocu-Mir-214-v2  Pab-Mir-214  Pbv-Mir-214-v2  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v2  Tgu-Mir-214-v2  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(rn6)		 chr13: 80130934-80130996 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-214-v2)		 Mir-199-P1-v1 chr13: 80125517-80125577 [+] UCSC Ensembl
Mir-199-P1-v2 chr13: 80125517-80125577 [+] UCSC Ensembl
Mir-199-P1-v3 chr13: 80125517-80125577 [+] UCSC Ensembl
Mir-214-v1 chr13: 80130934-80130996 [+] UCSC Ensembl
Mir-214-v2 chr13: 80130934-80130996 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCCUGGAUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAAUGACAACCA
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGUCCUGGAUGGACAGA--|          U          ACA           GAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGCA       \
                   CAACAGUACAC GACGGACAGA   GGACGACAUGU       C
ACCAACAGUAAGUCCGACC^          U          CAC           CCACUCG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
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Star sequence

Rno-Mir-214-v2_5p*
mirBase accessionMIMAT0017159
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
Get sequence
Proposed targets TargetScanVert: rno-miR-214-5p
miRDB: MIMAT0017159
Mature sequence

Rno-Mir-214-v2_3p
mirBase accessionMIMAT0000885
Sequence 
40- UACAGCAGGCACAGACAGGCAGU -63
Get sequence
Proposed targets microrna.org: MIMAT0000885
TargetScanVert: rno-miR-214-3p
miRDB: MIMAT0000885