MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-214-v1

Family name MIR-214 (all species)
Seed CAGCAGG
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-214-v2 
Orthologues Aca-Mir-214-v1  Ami-Mir-214-v1  Bta-Mir-214-v1  Cfa-Mir-214-v1  Cja-Mir-214  Cli-Mir-214-v1  Cmi-Mir-214-v1  Cpi-Mir-214-v1  Cpo-Mir-214-v1  Dno-Mir-214-v1  Eca-Mir-214-v1  Ete-Mir-214-v1  Gga-Mir-214-v1  Gja-Mir-214-v1  Hsa-Mir-214-v1  Laf-Mir-214  Lch-Mir-214  Mdo-Mir-214-v1  Mml-Mir-214-v1  Mmr-Mir-214-v1  Mmu-Mir-214-v1  Mun-Mir-214  Oan-Mir-214-v1  Ocu-Mir-214-v1  Pab-Mir-214  Pbv-Mir-214-v1  Rno-Mir-214-v1  Sha-Mir-214-v1  Spt-Mir-214  Sto-Mir-214-v1  Tgu-Mir-214-v1  Xtr-Mir-214-v1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(LepOcu1)		 LG10: 26287907-26287968 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCAUUGGCUGAGGGAGUUGUCGUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACUUCCUGCACCUGUACAGCAGGCACAGACAGGCAGACAGACGGCAGCCCACCGGACAGACAGACAU
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Structure
        10          20        30        40        50        60
UGCCAUUGGCUGAGGGA--|       G             ACA          AGAACUU 
                   GUUGUCGU UGUCUGCCUGUCU   CUUGCUGUGC       C
                   CGACGGCA ACAGACGGACAGA   GGACGACAUG       C
UACAGACAGACAGGCCACC^       G             CAC          UCCACGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-214-v1_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGC -22
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Mature sequence

Loc-Mir-214-v1_3p
mirBase accessionNone
Sequence 
40- ACAGCAGGCACAGACAGGCAGA -62
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