MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-214-v1

Family name MIR-214 (all species)
Seed CAGCAGG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-214-v2 
Orthologues Aca-Mir-214-v1  Ami-Mir-214-v1  Bta-Mir-214-v1  Cfa-Mir-214-v1  Cja-Mir-214  Cli-Mir-214-v1  Cpi-Mir-214-v1  Cpo-Mir-214-v1  Dno-Mir-214-v1  Eca-Mir-214-v1  Ete-Mir-214-v1  Gga-Mir-214-v1  Gja-Mir-214-v1  Hsa-Mir-214-v1  Laf-Mir-214  Lch-Mir-214  Loc-Mir-214-v1  Mdo-Mir-214-v1  Mml-Mir-214-v1  Mmr-Mir-214-v1  Mmu-Mir-214-v1  Mun-Mir-214  Oan-Mir-214-v1  Ocu-Mir-214-v1  Pab-Mir-214  Pbv-Mir-214-v1  Rno-Mir-214-v1  Sha-Mir-214-v1  Spt-Mir-214  Sto-Mir-214-v1  Tgu-Mir-214-v1  Xtr-Mir-214-v1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635895.1: 3665469-3665531 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCAAUGGCUGGAUGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAAAAUCCACUCACCUGUACAGCAGGCACAGACAGGCAGUCGCAUGACAACCCAGCCUGACUGACAGCCA
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Structure
        10          20        30        40        50        60 
CGCAAUGGCUGGAUGGA--|          U          ACA          AGAAAAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGC        \
                   CAACAGUACGC GACGGACAGA   GGACGACAUG        C
ACCGACAGUCAGUCCGACC^          U          CAC          UCCACUCA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-214-v1_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGC -22
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Mature sequence

Cmi-Mir-214-v1_3p
mirBase accessionNone
Sequence 
41- ACAGCAGGCACAGACAGGCAGU -63
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