MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-214-P2-v2

Family name MIR-214 (all species)
Seed ACAGCAG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-214
Paralogues Tni-Mir-214-P1-v1  Tni-Mir-214-P1-v2  Tni-Mir-214-P2-v1 
Orthologues Cja-Mir-214  Gmo-Mir-214-P2-v1  Gmo-Mir-214-P2-v2  Laf-Mir-214  Lch-Mir-214  Mal-Mir-214-P2-v1  Mal-Mir-214-P2-v2  Mun-Mir-214  Pab-Mir-214  Spt-Mir-214 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Gnathostomata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 15: 2935596-2935656 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-214-P2-v2)		 Mir-199-P1b-v1 15: 2934183-2934243 [+] UCSC Ensembl
Mir-199-P1b-v2 15: 2934183-2934243 [+] UCSC Ensembl
Mir-199-P1b-v3 15: 2934183-2934243 [+] UCSC Ensembl
Mir-214-P2-v1 15: 2935595-2935657 [+] UCSC Ensembl
Mir-214-P2-v2 15: 2935596-2935656 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCACCUGGCUGGAGGAGUUGCAGUGUGUCUGCCUAUCUCCACUUGCUGUGCAGAAUAUCCUCCAACCUGUACAGCAGGCACAGACAGGCAGAUAGACAUCAGCCCAUCGAGAGCGCCAGCA
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Structure
        10        20          30        40        50          
GCACCUGGCUGGAGGAGUUGCA--| G         A   CCA           GAAUAUC 
                        GU UGUCUGCCU UCU   CUUGCUGUGCA       \
                        CA AUAGACGGA AGA   GGACGACAUGU       C
ACGACCGCGAGAGCUACCCGACUA^ G         C   CAC           CCAACCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-214-P2-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCCUAUCUCCACUUGCUGUGCA -22
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Mature sequence

Tni-Mir-214-P2-v2_3p
mirBase accessionMIMAT0003027
Sequence 
39- UACAGCAGGCACAGACAGGCAG -61
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