MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-214-P1-v1

Family name MIR-214 (all species)
Seed CAGCAGG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-214
Paralogues Dre-Mir-214-P1-v2 
Orthologues Cja-Mir-214  Gmo-Mir-214-P1  Laf-Mir-214  Lch-Mir-214  Mal-Mir-214-P1-v1  Mal-Mir-214-P1-v2  Mun-Mir-214  Pab-Mir-214  Spt-Mir-214  Tni-Mir-214-P1-v1  Tni-Mir-214-P1-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Gnathostomata
Genome context
(danRer11)		 chr20: 14877660-14877721 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-214-P1-v1)		 Mir-199-P1a-v1 chr20: 14875474-14875534 [+] UCSC Ensembl
Mir-199-P1a-v2 chr20: 14875474-14875534 [+] UCSC Ensembl
Mir-199-P1a-v3 chr20: 14875474-14875534 [+] UCSC Ensembl
Mir-214-P1-v1 chr20: 14877660-14877721 [+] UCSC Ensembl
Mir-214-P1-v2 chr20: 14877660-14877721 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGCCAUUGACUGAGAGCGUUGUCUGUCUGCCUGUCUACACUUGCUGUGCAGAACUUCCUGCACCUGUACAGCAGGCACAGACAGGCAGACAGAUGGCAGCCCGCCUGACAGGCCACACA
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Structure
        10         20         30        40        50        60
UGCUGCCAUUGACUGAGA-  -| UG               ACA          AGAACUU 
                   GC GU  UCUGUCUGCCUGUCU   CUUGCUGUGC       C
                   CG CG  AGACAGACGGACAGA   GGACGACAUG       C
ACACACCGGACAGUCCGCC  A^ GU               CAC          UCCACGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-214-P1-v1_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGC -22
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Mature sequence

Dre-Mir-214-P1-v1_3p
mirBase accessionMIMAT0001283
Sequence 
40- ACAGCAGGCACAGACAGGCAGA -62
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Proposed targets TargetScanFish: dre-miR-214