MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-653

Family name MIR-653 (all species)
Seed UGAAACA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-653  Cfa-Mir-653  Cja-Mir-653  Cpo-Mir-653  Dno-Mir-653  Eca-Mir-653  Hsa-Mir-653  Mml-Mir-653  Mmu-Mir-653  Ocu-Mir-653  Pab-Mir-653  Rno-Mir-653 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007671.1: 58938858-58938916 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGAGGUUCUAAUUUCUCAUUCCUUCAGUGUUGAAACACUCUCUAGUGAACCAGGCUUCAAACGAAAUUCACUGGAGUUUGUUUCAAUAUUGCAAGAAUGGUAAGAUUGAAGCUACUGU
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Structure
        10          20        30        40        50         
CGGAGGUUCUAAUUUCU--|    CUU             CU          CCAGGCUU 
                   CAUUC   CAGUGUUGAAACA  CUCUAGUGAA        \
                   GUAAG   GUUAUAACUUUGU  GAGGUCACUU        C
UGUCAUCGAAGUUAGAAUG^    AAC             UU          AAAGCAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-653_5p

mirBase accessionNone
Sequence
0- UUGAAACACUCUCUAGUGAACC -22
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Star sequence

Mmr-Mir-653_3p*

mirBase accessionNone
Sequence
37- UUCACUGGAGUUUGUUUCAAUA -59
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