MirGeneDB ID | Mmr-Mir-653 |
Family name |
MIR-653 (all species) |
Seed |
UGAAACA |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-653
Cfa-Mir-653
Cja-Mir-653
Cpo-Mir-653
Dno-Mir-653
Eca-Mir-653
Hsa-Mir-653
Mml-Mir-653
Mmu-Mir-653
Ocu-Mir-653
Pab-Mir-653
Rno-Mir-653
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007671.1: 58938858-58938916 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGGAGGUUCUAAUUUCUCAUUCCUUCAGUGUUGAAACACUCUCUAGUGAACCAGGCUUCAAACGAAAUUCACUGGAGUUUGUUUCAAUAUUGCAAGAAUGGUAAGAUUGAAGCUACUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CGGAGGUUCUAAUUUCU--| CUU CU CCAGGCUU
CAUUC CAGUGUUGAAACA CUCUAGUGAA \
GUAAG GUUAUAACUUUGU GAGGUCACUU C
UGUCAUCGAAGUUAGAAUG^ AAC UU AAAGCAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-653_5p |
mirBase accession | None |
Sequence |
0- UUGAAACACUCUCUAGUGAACC -22
Get sequence
|
Star sequence |
Mmr-Mir-653_3p* |
mirBase accession | None |
Sequence |
37- UUCACUGGAGUUUGUUUCAAUA -59
Get sequence
|