| MirGeneDB ID | Pab-Mir-653 |
|---|---|
| Family name | MIR-653 (all species) |
| Seed | UCACUGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-653 Cfa-Mir-653 Cja-Mir-653 Cpo-Mir-653 Dno-Mir-653 Eca-Mir-653 Hsa-Mir-653 Mml-Mir-653 Mmr-Mir-653 Mmu-Mir-653 Ocu-Mir-653 Rno-Mir-653 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054685.2: 82852827-82852883 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGAGGUUCUGAUUUUUCAUUCCUUCAGUGUUGAAACAAUCUCUACUGAACCAGCUUCAAACAAGUUCACUGGAGUUUGUUUCAAUAUUGCAAGAAUGAUAAGAUGGAAGCUACUUUGet precursor sequence |
| Structure | 10 20 30 40 50 CAGAGGUUCUGAUUUUU--| CUU U C CAGCUU CAUUC CAGUGUUGAAACAA CUCUA UGAAC \ GUAAG GUUAUAACUUUGUU GAGGU ACUUG C UUUCAUCGAAGGUAGAAUA^ AAC U C AACAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-653_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UUGAAACAAUCUCUACUGAACC -22
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|
| Mature sequence | Pab-Mir-653_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- UUCACUGGAGUUUGUUUCAAUA -57
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|
