MirGeneDB 3.0
MirGeneDB ID

Ple-Mir-12593

Family name MIR-12593 (all species)
Seed CAUUCUC
Species Thorny-headed worm 2 (Pomphorhynchus laevis)
MiRBase ID
Paralogues
Orthologues Ava-Mir-12593-P1a  Ava-Mir-12593-P1b  Ava-Mir-12593-P2a  Ava-Mir-12593-P2b  Bko-Mir-12593  Bpl-Mir-12593  Nag-Mir-12593-v1  Nag-Mir-12593-v2  Sne-Mir-12593 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(GCA_012934845.2_ASM1293484v2_PLE_genomic)		 WNNJ02001274.1: 31493-31548 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUACUCCAGCUCACAAGCAUCGUUGGUACACUGCUAUCUUAGGGAUAGUGAAAGCCAGUAUUCACAUUCUCUUAUGUAGCAGUGUUCCCUUACAAUGCAAUACACAUGAUGGCAA
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Structure
        10        20          30        40        50       
GAUACUCCAGCUCACAAG   C  U--| U          CUU     UA    AAGC 
                  CAU GU   GG ACACUGCUAU   AGGGA  GUGA    C
                  GUA CA   CC UGUGACGAUG   UCUCU  CACU    A
AACGGUAGUACACAUAAC   A  UUC^ U          UAU     UA    UAUG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Ple-Mir-12593_5p*
mirBase accessionNone
Sequence 
0- ACUGCUAUCUUAGGGAUAGUGA -22
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Mature sequence

Ple-Mir-12593_3p
mirBase accessionNone
Sequence 
34- ACAUUCUCUUAUGUAGCAGUGU -56
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