MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-17-P3b

Family name MIR-17 (all species)
Seed AAAGUGC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-17-P1a  Sto-Mir-17-P1b  Sto-Mir-17-P1c  Sto-Mir-17-P1d  Sto-Mir-17-P2a  Sto-Mir-17-P2c  Sto-Mir-17-P4a  Sto-Mir-17-P4b  Sto-Mir-17-P4c 
Orthologues Cmi-Mir-17-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01001891.1: 345278-345340 [+]
Precursor
(pre-Mir +30nt flank)
UACAGAUGCUUUAUUCUGGGUCUGGAGUGCCAAAGUGCAAAUAGUGGUAGGUAGUGCAGAGUUAAUCCUAGCUACACUAUUUACACUUCAAGCAUUCUUGUGCCCAAUUGCUGACCGGAAAUA
Get precursor sequence
Structure
        10         20         30         40        50        60 
UACAGAUGCUUUAUUCU-    CU-       CA-|    C        G   G AGUGCAGA 
                  GGGU   GGAGUGC   AAGUG AAAUAGUG UAG U        \
                  CCCG   UCUUACG   UUCAC UUUAUCAC AUC A        G
AUAAAGGCCAGUCGUUAA    UGU       AAC^    A        -   G UCCUAAUU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-17-P3b_5p
mirBase accessionNone
Sequence 
0- CAAAGUGCAAAUAGUGGUAGGU -22
Get sequence
Star sequence

Sto-Mir-17-P3b_3p*
mirBase accessionNone
Sequence 
41- CUACACUAUUUACACUUCAAGC -63
Get sequence