| MirGeneDB ID | Tca-Mir-11624-P1b |
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| Family name |
MIR-11624 (all species) |
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| Seed |
GAUAUGC |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-11624a-2
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| Paralogues |
Tca-Mir-11624-P1a
Tca-Mir-11624-P2
Tca-Mir-11624-P3
Tca-Mir-11624-P4
Tca-Mir-11624-P5
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| Orthologues |
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| Node of Origin (locus) |
T. castaneum
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| Node of Origin (family) |
T. castaneum
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Genome context
(Tcas5.2) |
LG5: 48829-48889 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAGUUUUAAAUUAUAAUAGAUAAGUGUAAAAUUGAGACUUUAACAUUUUCAUGCAAUUUAUAUCAACAUGAUAUGCUAGAGUGUCGGUUCUACAACUAUCACAAAUCAAUCUUCGAACCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAGUUUUAAAUUAUAAUA---| AG A G A UU CAAUUU
GAUA UGUA AAUUGA ACUUUA CAU UCAUG \
CUAU ACAU UUGGCU UGAGAU GUA AGUAC A
AACCAAGCUUCUAACUAAACA^ CA C G C U- AACUAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Star sequence |
Tca-Mir-11624-P1b_5p* |
| mirBase accession | MIMAT0045523 |
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| Sequence |
0- AUUGAGACUUUAACAUUUUCAUG -23
Get sequence
|
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| Mature sequence |
Tca-Mir-11624-P1b_3p |
| mirBase accession | MIMAT0045524 |
|---|
| Sequence |
38- UGAUAUGCUAGAGUGUCGGUUCU -61
Get sequence
|
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