MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-11624-P2

Family name MIR-11624 (all species)
Seed GAUAUGC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-11624a-3
Paralogues Tca-Mir-11624-P1a  Tca-Mir-11624-P1b  Tca-Mir-11624-P3  Tca-Mir-11624-P4  Tca-Mir-11624-P5 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG5: 505254-505313 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-11624-P2)		 Mir-11624-P2 LG5: 505254-505313 [+] Ensembl
Mir-11624-P1a LG5: 505653-505713 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGUUUUAAAUAAUAAUAGAUUGAUGUAAAAUUGAGACUUUAACAUUUUCAUGCAAUUUAUAUCAACAUGAUAUGCUAGAGUGUCGGUUUUACAACUAUCACAAAUCAAUCUUCGAACCA
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Structure
        10          20        30        40        50          
UAGUUUUAAAUAAUAAUA--|  UGA           G      A   UU     CAAUUU 
                    GAU   UGUAAAAUUGA ACUUUA CAU  UCAUG      \
                    CUA   ACAUUUUGGCU UGAGAU GUA  AGUAC      A
ACCAAGCUUCUAACUAAACA^  UCA           G      C   U-     AACUAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-11624-P2_5p*
mirBase accessionMIMAT0045523
Sequence 
0- AUUGAGACUUUAACAUUUUCAUG -23
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Mature sequence

Tca-Mir-11624-P2_3p
mirBase accessionMIMAT0045525
Sequence 
38- UGAUAUGCUAGAGUGUCGGUUU -60
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