MirGeneDB 3.0

MirGeneDB ID

Tgu-Mir-726

Family name MIR-726 (all species)
Seed UCACUAC
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues
Orthologues Aca-Mir-726  Cpi-Mir-726  Dre-Mir-726  Gga-Mir-726  Gja-Mir-726  Loc-Mir-726  Mal-Mir-726  Spt-Mir-726  Tni-Mir-726  Xla-Mir-726-P1  Xla-Mir-726-P2  Xtr-Mir-726 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(TaeGut1_add)
RRCB01000041.1: 626298-626356 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCCCCGUGUCCCCCCGGGCCGUGCAGUCGGAAUUCCGCUAGUUCUGAACUUUUUCCUGGAAAAAAGCUCACUACUGGCAGAACUCGGCCGCGCGCCCCACUGCGGGGGCACCCGGGG
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Structure
        10          20        30        40        50         
CCCCCCCGUGUCCCCCC--|  C     A     AA   C      UC   A  UUUUCC 
                   GGG CGUGC GUCGG  UUC GCUAGU  UGA CU      U
                   CCC GCGCG CGGCU  AAG CGGUCA  ACU GA      G
GGGGCCCACGGGGGCGUCA^  C     C     C-   A      UC   C  AAAAAG 
       110       100        90         80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-726_5p*

mirBase accessionNone
Sequence
0- GGAAUUCCGCUAGUUCUGAACU -22
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Mature sequence

Tgu-Mir-726_3p

mirBase accessionNone
Sequence
38- CUCACUACUGGCAGAACUCGG -59
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