MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-726-P1

Family name MIR-726 (all species)
Seed UCACUAC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-726-P2 
Orthologues Aca-Mir-726  Cpi-Mir-726  Dre-Mir-726  Gga-Mir-726  Gja-Mir-726  Loc-Mir-726  Mal-Mir-726  Spt-Mir-726  Tgu-Mir-726  Tni-Mir-726  Xtr-Mir-726 
Node of Origin (locus) X. laevis
Node of Origin (family) Osteichthyes
Genome context
(GCF_001663975.1_XLA_v2)		 NW_016694841.1: 180023-180087 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCCUGUCCUGUUCCUGUGGGUGCUUGUCAGGAAUUCCGCUAGUUCUGAACUAUUCCAUGUUAGUAAGUAAAAGUUCACUACUAGCAGAAUUCGGCCACGUACCACACUUGCUGCCCAAAGGACA
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Structure
        10          20         30        40        50        60  
CGCCUGUCCUGUUCCUG-  -     UU-|  AG      C      UC      AUUCCAUGU 
                  UG GGUGC   GUC  GAAUUC GCUAGU  UGAACU         U
                  AC CCAUG   CGG  CUUAAG CGAUCA  ACUUGA         A
ACAGGAAACCCGUCGUUC  A     CAC^  --      A      UC      AAAUGAAUG 
   120       110       100          90        80        70
Deep sequencing
CommentThe 3' end of the 3p arm is primarily monoadenylated rather than monouridylated.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Star sequence

Xla-Mir-726-P1_5p*
mirBase accessionNone
Sequence 
0- GGAAUUCCGCUAGUUCUGAACU -22
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Mature sequence

Xla-Mir-726-P1_3p
mirBase accessionNone
Sequence 
44- UUCACUACUAGCAGAAUUCGG -65
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