MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-19-P2d

Family name MIR-19 (all species)
Seed GUGCAAA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-19-P1a1  Tni-Mir-19-P1a2  Tni-Mir-19-P2a1  Tni-Mir-19-P2a2 
Orthologues Cmi-Mir-19-P2d  Dre-Mir-19-P2d  Gmo-Mir-19-P2d  Lch-Mir-19-P2d  Loc-Mir-19-P2d  Mal-Mir-19-P2d  Mun-Mir-19-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 1: 5569689-5569755 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGGAGACCAGGAUGGUCUGGGCCUGGUCAGCUUUGCGGGGUCGGCAGUCAGCCUGUGUCUGGAAGGAGCAGCUGUGCAAACCCAUGCAAAGCUGACCACGUCCAGAACUCUCAGCCCCCGCGCAG
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Structure
        10          20        30         40        50        60   
CCUGGAGACCAGGAUGG--       C              -|   CG   GU    CUGUGUCU 
                   UCUGGGC UGGUCAGCUUUGCG GGGU  GCA  CAGC        G
                   AGACCUG ACCAGUCGAAACGU CCCA  CGU  GUCG        G
GACGCGCCCCCGACUCUCA       C              A^   AA   --    ACGAGGAA 
     120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-19-P2d_5p*
mirBase accessionNone
Sequence 
0- AGCUUUGCGGGGUCGGCAGUCAGC -24
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Mature sequence

Tni-Mir-19-P2d_3p
mirBase accessionNone
Sequence 
44- UGUGCAAACCCAUGCAAAGCUGA -67
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