MirGeneDB 3.0

18 microRNA genes with seed AAAGCUA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Mom-Mir-9 None MIR-9 CUUUGGU None None JARFOD010000029.1 763005 763066 + Bilateria Bilateria No 1
Hmi-Mir-9 None MIR-9 AAAGCUA None None SCFE01000333.1 89277 89326 - Bilateria Bilateria Unknown 1
Sko-Mir-9-v2 sko-mir-9 MIR-9 CUUUGGU MIMAT0009610 MIMAT0009618 NW_003125887.1 164505 164564 - Bilateria Bilateria No 1
Pfl-Mir-9-v2 None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria No 1
Tca-Mir-9-P9b-v2 tca-mir-9d MIR-9 AAAGCUA MIMAT0018748 MIMAT0018749 LG5 7455728 7455788 + T. castaneum Bilateria No 1
Gpa-Mir-9-P10 None MIR-9 CUUUGGU None None Scaffold27 1664994 1665054 - Pancrustacea Bilateria No 1 1
Aga-Mir-9-P12 aga-mir-79 MIR-9 AAAGCUA None MIMAT0001524 NC_064602.1 5875198 5875261 - Neoptera Bilateria No
Gpa-Mir-9-P12-v1 None MIR-9 AAAGCUA None None Scaffold60 382326 382387 - Neoptera Bilateria No 1 1
Dya-Mir-9-P12-v1 dya-mir-79 MIR-9 AAAGCUA None MIMAT0009124 2R 4404435 4404497 - Neoptera Bilateria No
Dsi-Mir-9-P12-v1 None MIR-9 AAAGCUA None None 2L 16226326 16226388 + Neoptera Bilateria No
Dmo-Mir-9-P12-v1 dmo-mir-79 MIR-9 AAAGCUA None MIMAT0008690 scaffold_6500 7202147 7202208 + Neoptera Bilateria No 1
Dme-Mir-9-P12-v1 dme-mir-79 MIR-9 AAAGCUA MIMAT0020814 MIMAT0000352 2L 16698572 16698634 + Neoptera Bilateria No
Dan-Mir-9-P12-v1 dan-mir-79 MIR-9 AAAGCUA None MIMAT0008430 scaffold_12916 15864734 15864795 - Neoptera Bilateria No
Aae-Mir-9-P12-v1 aae-mir-79 MIR-9 AAAGCUA MIMAT0014294 MIMAT0014295 supercont1.785 213277 213338 + Neoptera Bilateria No
Pca-Mir-9-P31 None MIR-9 CUUUGGU None None KQ715418.1 82183 82242 + P. caudatus Bilateria No
Sro-Mir-9-P35a None MIR-9 AAAGCUA None None JANVAR010000473.1 1213595 1213662 + S. roscoffensis Bilateria No
Sro-Mir-9-P35b None MIR-9 AAAGCUA None None JANVAR010000473.1 1259271 1259338 + S. roscoffensis Bilateria No
Sro-Mir-9-P36 None MIR-9 AAAGCUA None None JANVAR010000606.1 626870 626929 + S. roscoffensis Bilateria No

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