MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-9-P12

Family name MIR-9 (all species)
Seed AAAGCUA
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-79
Paralogues Aga-Mir-9-P10  Aga-Mir-9-P11  Aga-Mir-9-P13 
Orthologues Aae-Mir-9-P12-v1  Aae-Mir-9-P12-v2  Agr-Mir-9  Bfl-Mir-9  Bge-Mir-9-P12-v1  Bge-Mir-9-P12-v2  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P12-v1  Dan-Mir-9-P12-v2  Dgr-Mir-9  Dlo-Mir-9-P12-v1  Dlo-Mir-9-P12-v2  Dme-Mir-9-P12-v1  Dme-Mir-9-P12-v2  Dmo-Mir-9-P12-v1  Dmo-Mir-9-P12-v2  Dsi-Mir-9-P12-v1  Dsi-Mir-9-P12-v2  Dya-Mir-9-P12-v1  Dya-Mir-9-P12-v2  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gpa-Mir-9-P12-v1  Gpa-Mir-9-P12-v2  Gsa-Mir-9  Gsp-Mir-9  Hme-Mir-9-P12  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  Tca-Mir-9-P12  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064602.1: 5875198-5875261 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-9-P12)		 Mir-9-P13 NC_064602.1: 5874685-5874750 [-] Ensembl
Mir-9-P12 NC_064602.1: 5875198-5875261 [-] Ensembl
Mir-306 NC_064602.1: 5875483-5875544 [-] Ensembl
Mir-9-P11 NC_064602.1: 5878052-5878119 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUUACUACGAGAACGCCCUUUUGUCCGCGCUUUGGCGCUUUAGCUGUAUGAUAGAAUUUGAGCUAUUUCAUAAAGCUAGAUUACCAAAGCAUAGACGAAUUGGGACAAUGCUACCUAAUAAA
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Structure
        10         20         30        40        50        60 
GAAUUACUACGAGAACG-   U-|     CGC       CGC       G    AUAGAAUU 
                  CCC  UUUGUC   GCUUUGG   UUUAGCU UAUG        U
                  GGG  AAGCAG   CGAAACC   AGAUCGA AUAC        G
AAAUAAUCCAUCGUAACA   UU^     AUA       AUU       A    UUUAUCGA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-9-P12_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCUUUGGCGCUUUAGCUGUAUG -22
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Mature sequence

Aga-Mir-9-P12_3p
mirBase accessionMIMAT0001524
Sequence 
42- UAAAGCUAGAUUACCAAAGCAU -64
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