MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-9-P12-v2

Family name MIR-9 (all species)
Seed UUUGGUA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-9-P9  Dlo-Mir-9-P10  Dlo-Mir-9-P12-v1  Dlo-Mir-9-P13 
Orthologues Aae-Mir-9-P12-v1  Aae-Mir-9-P12-v2  Aga-Mir-9-P12  Agr-Mir-9  Bfl-Mir-9  Bge-Mir-9-P12-v1  Bge-Mir-9-P12-v2  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P12-v1  Dan-Mir-9-P12-v2  Dgr-Mir-9  Dme-Mir-9-P12-v1  Dme-Mir-9-P12-v2  Dmo-Mir-9-P12-v1  Dmo-Mir-9-P12-v2  Dsi-Mir-9-P12-v1  Dsi-Mir-9-P12-v2  Dya-Mir-9-P12-v1  Dya-Mir-9-P12-v2  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gpa-Mir-9-P12-v1  Gpa-Mir-9-P12-v2  Gsa-Mir-9  Gsp-Mir-9  Hme-Mir-9-P12  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  Tca-Mir-9-P12  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087228.1: 37908-37967 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUCACUUCAUUGCAUAGCUUUUGUCUUUUCUUUGGUAAUACAGCUCUAUGAUUAAUAGAGGAAUCUCAUAAAGCUAGAUUACCAAAGCAAAGAACAAUAGAGCUAAAUCAACACUGUCA
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Structure
        10         20         30        40        50         
CAUCACUUCAUUGCAUAG-  U   -|    U          AC    C     UUAAUA 
                   CU UUG UCUUU CUUUGGUAAU  AGCU UAUGA      G
                   GA AAC AGAAA GAAACCAUUA  UCGA AUACU      A
ACUGUCACAACUAAAUCGA  U   A^    C          GA    A     CUAAGG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Sr Sr
Mature sequence

Dlo-Mir-9-P12-v2_5p

mirBase accessionNone
Sequence
0- CUUUGGUAAUACAGCUCUAUGA -22
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Star sequence

Dlo-Mir-9-P12-v2_3p*

mirBase accessionNone
Sequence
38- AUAAAGCUAGAUUACCAAAGCA -60
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