MirGeneDB ID | Dlo-Mir-9-P12-v2 |
Family name |
MIR-9 (all species) |
Seed |
UUUGGUA |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-9-P9
Dlo-Mir-9-P10
Dlo-Mir-9-P12-v1
Dlo-Mir-9-P13
|
Orthologues |
Aae-Mir-9-P12-v1
Aae-Mir-9-P12-v2
Aga-Mir-9-P12
Agr-Mir-9
Bfl-Mir-9
Bge-Mir-9-P12-v1
Bge-Mir-9-P12-v2
Bko-Mir-9
Bla-Mir-9
Bpl-Mir-9
Cin-Mir-9
Cte-Mir-9
Dan-Mir-9-P12-v1
Dan-Mir-9-P12-v2
Dgr-Mir-9
Dme-Mir-9-P12-v1
Dme-Mir-9-P12-v2
Dmo-Mir-9-P12-v1
Dmo-Mir-9-P12-v2
Dsi-Mir-9-P12-v1
Dsi-Mir-9-P12-v2
Dya-Mir-9-P12-v1
Dya-Mir-9-P12-v2
Eba-Mir-9
Egr-Mir-9
Esc-Mir-9
Gpa-Mir-9-P12-v1
Gpa-Mir-9-P12-v2
Gsa-Mir-9
Gsp-Mir-9
Hme-Mir-9-P12
Hmi-Mir-9
Hru-Mir-9
Isc-Mir-9
Lan-Mir-9
Lgi-Mir-9
Llo-Mir-9
Mom-Mir-9
Npo-Mir-9
Obi-Mir-9
Ofu-Mir-9
Ovu-Mir-9
Pau-Mir-9
Pdu-Mir-9
Pmi-Mir-9
Pve-Mir-9
Rph-Mir-9
Sma-Mir-9
Snu-Mir-9
Spu-Mir-9
Tca-Mir-9-P12
War-Mir-9
Xbo-Mir-9
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087228.1: 37908-37967 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUCACUUCAUUGCAUAGCUUUUGUCUUUUCUUUGGUAAUACAGCUCUAUGAUUAAUAGAGGAAUCUCAUAAAGCUAGAUUACCAAAGCAAAGAACAAUAGAGCUAAAUCAACACUGUCA
Get precursor sequence
|
Structure | 10 20 30 40 50
CAUCACUUCAUUGCAUAG- U -| U AC C UUAAUA
CU UUG UCUUU CUUUGGUAAU AGCU UAUGA G
GA AAC AGAAA GAAACCAUUA UCGA AUACU A
ACUGUCACAACUAAAUCGA U A^ C GA A CUAAGG
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dlo-Mir-9-P12-v2_5p |
mirBase accession | None |
Sequence |
0- CUUUGGUAAUACAGCUCUAUGA -22
Get sequence
|
Star sequence |
Dlo-Mir-9-P12-v2_3p* |
mirBase accession | None |
Sequence |
38- AUAAAGCUAGAUUACCAAAGCA -60
Get sequence
|