Mir-9-P10

MirGeneDB ID

Aga-Mir-9-P10

Family name

MIR-9 (all species)

Seed

CUUUGGU

Species

African malaria mosquito (Anopheles gambiae)

MiRBase ID

aga-mir-9a

Paralogues

Aga-Mir-9-P11 Aga-Mir-9-P12 Aga-Mir-9-P13

Orthologues

Aae-Mir-9-P10a Aae-Mir-9-P10b Agr-Mir-9 Bfl-Mir-9 Bge-Mir-9-P10 Bko-Mir-9 Bla-Mir-9 Bpl-Mir-9 Cin-Mir-9 Cte-Mir-9 Dan-Mir-9-P10 Dgr-Mir-9 Dlo-Mir-9-P10 Dma-Mir-9-P10 Dme-Mir-9-P10 Dmo-Mir-9-P10 Dpu-Mir-9-P10 Dsi-Mir-9-P10 Dya-Mir-9-P10 Eba-Mir-9 Egr-Mir-9 Esc-Mir-9 Gpa-Mir-9-P10 Gsa-Mir-9 Gsp-Mir-9 Hme-Mir-9-P10 Hmi-Mir-9 Hru-Mir-9 Isc-Mir-9 Lan-Mir-9 Lgi-Mir-9 Llo-Mir-9 Mom-Mir-9 Npo-Mir-9 Obi-Mir-9 Ofu-Mir-9 Ovu-Mir-9 Pau-Mir-9 Pdu-Mir-9 Pmi-Mir-9 Pve-Mir-9 Rph-Mir-9 Sma-Mir-9 Snu-Mir-9 Spu-Mir-9 Tca-Mir-9-P10 War-Mir-9 Xbo-Mir-9

Node of Origin (locus)

Pancrustacea

Node of Origin (family)

Bilateria

Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)

NC_064601.1: 84028169-84028230 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

CCCUCUUCUAUAUUCUCUUCGUCAAUGUUCUCUUUGGUUAUCUAGCUGUAUGAGUGUAUUUUAAACGUCAUAAAGCUAGCAUACCGAAGUUAAUAAUUGACUGAUACUCAUCGAUGGACUCA

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Structure

        10        20          30        40        50        60
CCCUCUUCUAUAUUCUCUUC-     -|   CU       UAU      G     GUGUAU 
                     GUCAA UGUU  CUUUGGU   CUAGCU UAUGA      U
                     CAGUU AUAA  GAAGCCA   GAUCGA AUACU      U
ACUCAGGUAGCUACUCAUAGU     A^   UU       UAC      A     GCAAAU 
120       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Sr	Sr	Sr	Sr	Sr	Sr	Sr	Sr	Sr

Mature sequence

Aga-Mir-9-P10_5p

mirBase accession

MIMAT0001526

Sequence

0- UCUUUGGUUAUCUAGCUGUAUGA -23

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Star sequence

Aga-Mir-9-P10_3p*

mirBase accession

None

Sequence

39- AUAAAGCUAGCAUACCGAAGUUA -62

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