MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-9-P10

Family name MIR-9 (all species)
Seed CUUUGGU
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-9-P11  Bge-Mir-9-P12-v1  Bge-Mir-9-P12-v2  Bge-Mir-9-P13 
Orthologues Aae-Mir-9-P10a  Aae-Mir-9-P10b  Aga-Mir-9-P10  Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P10  Dgr-Mir-9  Dlo-Mir-9-P10  Dma-Mir-9-P10  Dme-Mir-9-P10  Dmo-Mir-9-P10  Dpu-Mir-9-P10  Dsi-Mir-9-P10  Dya-Mir-9-P10  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gpa-Mir-9-P10  Gsa-Mir-9  Gsp-Mir-9  Hme-Mir-9-P10  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  Tca-Mir-9-P10  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)		 KZ616519.1: 74858-74917 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACAUCACACGCAAGUUUGGCGCUGAUUUUUUCUUUGGUUAUCUAGCUGUAUGAGUGAAAUGAGCGUCAUAAAGCUAGGUUACCGAAGUUAAGAACAGCACCUCUUCAUCAAAAGGCGCGC
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Structure
        10          20        30        40        50         
ACAUCACACGCAAGUUU--| C    A    UU       U        G     GUGAA 
                   GG GCUG UUUU  CUUUGGU AUCUAGCU UAUGA     A
                   CC CGAC AGAA  GAAGCCA UGGAUCGA AUACU     U
CGCGCGGAAAACUACUUCU^ A    A    UU       U        A     GCGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-9-P10_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
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Star sequence

Bge-Mir-9-P10_3p*
mirBase accessionNone
Sequence 
37- AUAAAGCUAGGUUACCGAAGUUA -60
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