MirGeneDB ID | Aca-Mir-32 |
Family name |
MIR-32 (all species) |
Seed |
AUUGCAC |
Species |
Green anole lizard (Anolis carolinensis) |
MiRBase ID |
aca-mir-32
|
Paralogues |
|
Orthologues |
Ami-Mir-32
Bta-Mir-32
Cfa-Mir-32
Cja-Mir-32
Cli-Mir-32
Cmi-Mir-32
Cpi-Mir-32
Cpo-Mir-32
Dno-Mir-32
Eca-Mir-32
Ete-Mir-32
Gga-Mir-32
Gja-Mir-32
Hsa-Mir-32
Laf-Mir-32
Lch-Mir-32
Mdo-Mir-32
Mml-Mir-32
Mmr-Mir-32
Mmu-Mir-32
Mun-Mir-32
Neu-Mir-32
Oan-Mir-32
Ocu-Mir-32
Pab-Mir-32
Pbv-Mir-32
Rno-Mir-32
Sha-Mir-32
Spt-Mir-32
Sto-Mir-32
Tgu-Mir-32
Xla-Mir-32
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (anoCar2) |
6: 57468294-57468355 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAGCUCCCAUUCUGCUUGCUCUGGUGGGGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGGCUCAGUGCAAUUUAGUGUGUGCGAUAUUUUCACAUGAGUGCAUGCACACAGGUAUGGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAGCUCCCAUUCUGCUU--| UG GG U UGUUGUCA
GCUC GUG GAUAUUGCACAU ACUAAGUUGCA \
UGAG CAC UUAUAGCGUGUG UGAUUUAACGU C
CGGUAUGGACACACGUACG^ UA UU - GACUCGGG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Aca-Mir-32_5p |
mirBase accession | MIMAT0021932 |
Sequence |
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
|
Star sequence |
Aca-Mir-32_3p* |
mirBase accession | MIMAT0021933 |
Sequence |
41- CAAUUUAGUGUGUGCGAUAUU -62
Get sequence
|