| MirGeneDB ID | Tgu-Mir-32 |
|---|
| Family name |
MIR-32 (all species) |
|---|
| Seed |
AUUGCAC |
|---|
| Species |
Zebra finch (Taeniopygia guttata) |
|---|
| MiRBase ID |
tgu-mir-32
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aca-Mir-32
Ami-Mir-32
Bta-Mir-32
Cfa-Mir-32
Cja-Mir-32
Cli-Mir-32
Cmi-Mir-32
Cpi-Mir-32
Cpo-Mir-32
Dno-Mir-32
Eca-Mir-32
Ete-Mir-32
Gga-Mir-32
Gja-Mir-32
Hsa-Mir-32
Laf-Mir-32
Lch-Mir-32
Mdo-Mir-32
Mml-Mir-32
Mmr-Mir-32
Mmu-Mir-32
Mun-Mir-32
Neu-Mir-32
Oan-Mir-32
Ocu-Mir-32
Pab-Mir-32
Pbv-Mir-32
Rno-Mir-32
Sha-Mir-32
Spt-Mir-32
Sto-Mir-32
Xla-Mir-32
|
|---|
| Node of Origin (locus) |
Gnathostomata
|
|---|
| Node of Origin (family) |
Gnathostomata
|
|---|
Genome context
(TaeGut1_add) |
2: 86006614-86006675 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAGCUCCCAUUCUGCUUGCUCUGGUGGAGAUAUUGCACAUUACUAAGUUGCACGUUCUCACGGCCUCAGUGCAAUUUAGUGUGUGCGAUACUUUCACAUGAGUGCAUGCACACGGGUAUGGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAGCUCCCAUUCUGCUU--| UG A U CGUUCUCA
GCUC GUGGAG UAUUGCACAU ACUAAGUUGCA \
UGAG CACUUU AUAGCGUGUG UGAUUUAACGU C
CGGUAUGGGCACACGUACG^ UA C - GACUCCGG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Tgu-Mir-32_5p |
| mirBase accession | MIMAT0014584 |
|---|
| Sequence |
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
|
|---|
| Star sequence |
Tgu-Mir-32_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- CAAUUUAGUGUGUGCGAUACU -62
Get sequence
|
|---|
