| MirGeneDB ID | Lch-Mir-32 |
|---|---|
| Family name | MIR-32 (all species) |
| Seed | AUUGCAC |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-32 Ami-Mir-32 Bta-Mir-32 Cfa-Mir-32 Cja-Mir-32 Cli-Mir-32 Cmi-Mir-32 Cpi-Mir-32 Cpo-Mir-32 Dno-Mir-32 Eca-Mir-32 Ete-Mir-32 Gga-Mir-32 Gja-Mir-32 Hsa-Mir-32 Laf-Mir-32 Mdo-Mir-32 Mml-Mir-32 Mmr-Mir-32 Mmu-Mir-32 Mun-Mir-32 Neu-Mir-32 Oan-Mir-32 Ocu-Mir-32 Pab-Mir-32 Pbv-Mir-32 Rno-Mir-32 Sha-Mir-32 Spt-Mir-32 Sto-Mir-32 Tgu-Mir-32 Xla-Mir-32 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Gnathostomata |
| Genome context (LatCha1_add) |
JH128327.1: 205934-205995 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | UGAAGCUCUCUUUGCUUACUCUGGUGGAGAUAUUGCACAUUACCAAGUUGCAUGUCAUCAGGGCCUCAGUGCAACUUAGUAUGUGCGAUAUUUUCAUGCGAGUGCAUGCGCACGGAUGUGGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGAAGCUCUCUUUGCUU--| UG U C UGUCAUCA ACUC GUGGAGAUAUUGCACAU AC AAGUUGCA \ UGAG UACUUUUAUAGCGUGUA UG UUCAACGU G CGGUGUAGGCACGCGUACG^ CG - A GACUCCGG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Lch-Mir-32_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAUUGCACAUUACCAAGUUGCA -22
Get sequence
|
| Star sequence | Lch-Mir-32_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- CAACUUAGUAUGUGCGAUAUU -62
Get sequence
|
