MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-32

Family name MIR-32 (all species)
Seed AUUGCAC
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-32  Ami-Mir-32  Bta-Mir-32  Cfa-Mir-32  Cja-Mir-32  Cli-Mir-32  Cmi-Mir-32  Cpi-Mir-32  Cpo-Mir-32  Dno-Mir-32  Eca-Mir-32  Ete-Mir-32  Gga-Mir-32  Hsa-Mir-32  Laf-Mir-32  Lch-Mir-32  Mdo-Mir-32  Mml-Mir-32  Mmr-Mir-32  Mmu-Mir-32  Mun-Mir-32  Neu-Mir-32  Oan-Mir-32  Ocu-Mir-32  Pab-Mir-32  Pbv-Mir-32  Rno-Mir-32  Sha-Mir-32  Spt-Mir-32  Sto-Mir-32  Tgu-Mir-32  Xla-Mir-32 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015164189.1: 691560-691621 [+]
Precursor
(pre-Mir +30nt flank)
AAACUUCCGUUCUGCUUGCUCUGGUGGGGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCGGAGUGCAAUUUAGUGUGUGCGAUAUUUUCACGUGAGUGCAUGCACACAGGUAUGGC
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Structure
        10          20        30        40        50        60 
AAACUUCCGUUCUGCUU--|   UG   GG            U           UGUUGUCA 
                   GCUC  GUG  GAUAUUGCACAU ACUAAGUUGCA        \
                   UGAG  CAC  UUAUAGCGUGUG UGAUUUAACGU        C
CGGUAUGGACACACGUACG^   UG   UU            -           GAGGCCGG 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Gja-Mir-32_5p
mirBase accessionNone
Sequence 
0- UAUUGCACAUUACUAAGUUGCA -22
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Star sequence

Gja-Mir-32_3p*
mirBase accessionNone
Sequence 
41- CAAUUUAGUGUGUGCGAUAUU -62
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