| MirGeneDB ID | Xla-Mir-32 |
|---|
| Family name |
MIR-32 (all species) |
|---|
| Seed |
AUUGCAC |
|---|
| Species |
African clawed frog (Xenopus laevis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aca-Mir-32
Ami-Mir-32
Bta-Mir-32
Cfa-Mir-32
Cli-Mir-32
Cmi-Mir-32
Cpi-Mir-32
Cpo-Mir-32
Dno-Mir-32
Ete-Mir-32
Gga-Mir-32
Gja-Mir-32
Hsa-Mir-32
Lch-Mir-32
Mdo-Mir-32
Mml-Mir-32
Mmu-Mir-32
Mun-Mir-32
Oan-Mir-32
Ocu-Mir-32
Pbv-Mir-32
Rno-Mir-32
Sha-Mir-32
Spt-Mir-32
Sto-Mir-32
Tgu-Mir-32
|
|---|
| Node of Origin (locus) |
Gnathostomata
|
|---|
| Node of Origin (family) |
Gnathostomata
|
|---|
Genome context
(GCF_001663975.1_XLA_v2) |
NC_030734.1: 71910870-71910925 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACGUUUCCAUUCUUAUUGCUUGGGUGGAGAUAUUGCACAUUACUAAGUUGCAGGUUGCCUCAUUGCAAUUUAGAAUGUGUGAUAUUUUCACAUGAGUGCAUGCACGUGUUCCAGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACGUUUCCAUUCUUAUU--| GG UG A GGUUG
GCUU GUGGAGAUAU CACAUU CUAAGUUGCA \
UGAG CACUUUUAUA GUGUAA GAUUUAACGU C
CAGACCUUGUGCACGUACG^ UA GU - UACUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Xla-Mir-32_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
|
|---|
| Star sequence |
Xla-Mir-32_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CAAUUUAGAAUGUGUGAUAUU -56
Get sequence
|
|---|
