MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-32

Family name MIR-32 (all species)
Seed AUUGCAC
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-32
Paralogues
Orthologues Aca-Mir-32  Bta-Mir-32  Cfa-Mir-32  Cja-Mir-32  Cli-Mir-32  Cmi-Mir-32  Cpi-Mir-32  Cpo-Mir-32  Dno-Mir-32  Eca-Mir-32  Ete-Mir-32  Gga-Mir-32  Gja-Mir-32  Hsa-Mir-32  Laf-Mir-32  Lch-Mir-32  Mdo-Mir-32  Mml-Mir-32  Mmr-Mir-32  Mmu-Mir-32  Mun-Mir-32  Neu-Mir-32  Oan-Mir-32  Ocu-Mir-32  Pab-Mir-32  Pbv-Mir-32  Rno-Mir-32  Sha-Mir-32  Spt-Mir-32  Sto-Mir-32  Tgu-Mir-32  Xla-Mir-32 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017714011.1: 2619268-2619329 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AAGCUCCCAUUCUGCUUGCUCUGGUGGAUAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCUCAGUGCAAUUUAGUGUGUGCGAUAUUUUCACAUGAGUGCAUGCACACGGGUAUGGC
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Structure
        10          20        30        40        50        60 
AAGCUCCCAUUCUGCUU--|   UG     U           U           UGUUGUCA 
                   GCUC  GUGGA AUAUUGCACAU ACUAAGUUGCA        \
                   UGAG  CACUU UAUAGCGUGUG UGAUUUAACGU        C
CGGUAUGGGCACACGUACG^   UA     U           -           GACUCCGG 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ami-Mir-32_5p
mirBase accessionMIMAT0038090
Sequence 
0- UAUUGCACAUUACUAAGUUGCA -22
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Star sequence

Ami-Mir-32_3p*
mirBase accessionMIMAT0038091
Sequence 
41- CAAUUUAGUGUGUGCGAUAUU -62
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