MirGeneDB ID | Neu-Mir-32 |
---|---|
Family name | MIR-32 (all species) |
Seed | AUUGCAC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Aca-Mir-32 Ami-Mir-32 Bta-Mir-32 Cfa-Mir-32 Cja-Mir-32 Cli-Mir-32 Cmi-Mir-32 Cpi-Mir-32 Cpo-Mir-32 Dno-Mir-32 Eca-Mir-32 Ete-Mir-32 Gga-Mir-32 Gja-Mir-32 Hsa-Mir-32 Laf-Mir-32 Lch-Mir-32 Mdo-Mir-32 Mml-Mir-32 Mmr-Mir-32 Mmu-Mir-32 Mun-Mir-32 Oan-Mir-32 Ocu-Mir-32 Pab-Mir-32 Pbv-Mir-32 Rno-Mir-32 Sha-Mir-32 Spt-Mir-32 Sto-Mir-32 Tgu-Mir-32 Xla-Mir-32 |
Node of Origin (locus) | Gnathostomata |
Node of Origin (family) | Gnathostomata |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 63403299-63403360 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | AUGUUCUCAUUCUGCUUGCUCUGGUGGAGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCUUGGUGCAAUUUAGUAUGUGUGAUAUUUUCACAUGAGUGCAUGCACACGGGUAUGGCGet precursor sequence |
Structure | 10 20 30 40 50 60 AUGUUCUCAUUCUGCUU--| UG UG U UGUUGUCA GCUC GUGGAGAUAU CACAU ACUAAGUUGCA \ UGAG CACUUUUAUA GUGUA UGAUUUAACGU C CGGUAUGGGCACACGUACG^ UA GU - GGUUCCGG 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), UGUG in loop |
Mature sequence | Neu-Mir-32_5p |
mirBase accession | None |
Sequence |
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
|
Star sequence | Neu-Mir-32_3p* (predicted) |
mirBase accession | None |
Sequence |
41- CAAUUUAGUAUGUGUGAUAUU -62
Get sequence
|