MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-10-P2o3

Family name MIR-10 (all species)
Seed ACCCGUA
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-100a-1
Paralogues Asu-Mir-10-P1  Asu-Mir-10-P2o4  Asu-Mir-10-P2o5  Asu-Mir-10-P2o6  Asu-Mir-10-P2o7  Asu-Mir-10-P2o8  Asu-Mir-10-P3  Asu-Mir-10-P4 
Orthologues Aae-Mir-10-P2  Adi-Mir-10  Aga-Mir-10-P2  Agr-Mir-10-P2  Asp-Mir-10  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bge-Mir-10-P2  Bko-Mir-10-P2  Bla-Mir-10-P2-v1  Bla-Mir-10-P2-v2  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dgr-Mir-10-P2  Dlo-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Eba-Mir-10-P2  Gpa-Mir-10-P2  Gsp-Mir-10-P2  Hru-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Lhy-Mir-10-P2  Llo-Mir-10-P2  Lpo-Mir-10-P2o  Mgi-Mir-10-P2  Mom-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ofu-Mir-10-P2  Ovu-Mir-10-P2  Pau-Mir-10-P2  Pca-Mir-10-P2  Pdu-Mir-10-P2  Pfl-Mir-10-P2  Ple-Mir-10-P2  Pmi-Mir-10-P2  Pve-Mir-10-P2  Rph-Mir-10-P2  Sko-Mir-10-P2  Snu-Mir-10-P2  Tca-Mir-10-P2  Tur-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) A.suum
Node of Origin (family) Eumetazoa
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold883: 122323-122381 [+]
Clustered miRNAs
(< 50kb from Mir-10-P2o3)		 Mir-10-P2o4 Scaffold883: 121212-121269 [+]
Mir-10-P2o3 Scaffold883: 122323-122381 [+]
Precursor
(pre-Mir +30nt flank)
CUCGCGUUAUUAAAUUGGCGGCUGGCGGUAAACCCGUAGAUCCGAACUUGUGUUGUGUAUUUGGUAACGCAAUUCGCCUCUCGGGUGCAUCGCUGAUUAGCCGUUGAUAUCCCUUACAA
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Structure
        10        20            30        40        50          
CUCGCGUUAUUAAAUUGGCG   ----|     AA     U   UC    C       GUGUA 
                    GCU    GGCGGU  ACCCG AGA  CGAA UUGUGUU     \
                    CGA    UCGCUA  UGGGC UCU  GCUU AACGCAA     U
AACAUUCCCUAUAGUUGC--   UUAG^     CG     -   CC    -       UGGUU 
       110         100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Mature sequence

Asu-Mir-10-P2o3_5p
mirBase accessionMIMAT0021487
Sequence 
0- AACCCGUAGAUCCGAACUUGUGUU -24
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Star sequence

Asu-Mir-10-P2o3_3p* (predicted)
mirBase accessionMIMAT0021488
Sequence 
37- CGCAAUUCGCCUCUCGGGUGCA -59
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