MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-277-P11

Family name MIR-277 (all species)
Seed AAAUGCA
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-277-P10 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075493.1: 6239105-6239166 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAUAUAUAUAUGUACCGUUCAUUUGCUCGUGCCCGGCAAUGCCUUUGCACGUGACCACCAAAAGACUGUAAAUGCAUUGGUCUGGUACGACCCAUUGGAACGUUUUCAUCGUUGUCUUGU
Get precursor sequence
Structure
        10         20         30         40        50          
UAUAUAUAUAUAUGUAC-     AUU  C-       C  -|     C      CGUGACCA 
                  CGUUC   UG  UCGUGCC GG CAAUGC UUUGCA        \
                  GCAAG   AC  AGCAUGG CU GUUACG AAAUGU        C
UGUUCUGUUGCUACUUUU     GUU  CC       U  G^     U      CAGAAAAC 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To To
Star sequence

Ava-Mir-277-P11_5p*
mirBase accessionNone
Sequence 
0- GUGCCCGGCAAUGCCUUUGCA -21
Get sequence
Mature sequence

Ava-Mir-277-P11_3p
mirBase accessionNone
Sequence 
40- UAAAUGCAUUGGUCUGGUACGA -62
Get sequence