MirGeneDB 3.0

MirGeneDB ID

Bge-Mir-29-P2g

Family name MIR-29 (all species)
Seed AGCACCA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-29-P1k  Bge-Mir-29-P1l  Bge-Mir-29-P2h 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2g  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dme-Mir-29-P2g  Dmo-Mir-29-P2g  Dpu-Mir-29-P2  Dsi-Mir-29-P2g  Dya-Mir-29-P2g  Eba-Mir-29-P2  Esc-Mir-29-P2  Gpa-Mir-29-P2g  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  Tca-Mir-29-P2g  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ615958.1: 104380-104439 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGCAUGUGCACUAACCUGCUGUGAGCAAAGCUGACUCGUGCGGUUGCCACGUUGUGUCUGAGAUGCGUAGCACCACAUGAUUCAGCUUAGUUCGCAGUAGCCUCUAACAGCCGCUGCU
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Structure
        10         20        30        40        50        60
CUCGCAUGUGCACUAAC-|          A       C     C   U  C   UUGUGU 
                  CUGCUGUGAGC AAGCUGA UCGUG GGU GC ACG      C
                  GAUGACGCUUG UUCGACU AGUAC CCA CG UGC      U
UCGUCGCCGACAAUCUCC^          A       U     A   -  A   GUAGAG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Mir-29-P2g_5p*

mirBase accessionNone
Sequence
0- AGCUGACUCGUGCGGUUGCCACG -23
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Mature sequence

Bge-Mir-29-P2g_3p

mirBase accessionNone
Sequence
39- UAGCACCACAUGAUUCAGCUU -60
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