MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-29-P2g

Family name MIR-29 (all species)
Seed AGCACCA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues Dan-Mir-29-P1  Dan-Mir-29-P2h 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2g  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dme-Mir-29-P2g  Dmo-Mir-29-P2g  Dpu-Mir-29-P2  Dsi-Mir-29-P2g  Dya-Mir-29-P2g  Eba-Mir-29-P2  Esc-Mir-29-P2  Gpa-Mir-29-P2g  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  Tca-Mir-29-P2g  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)		 scaffold_13340: 13021693-13021752 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGACAAAUGUCAUUCGCCUGUCCUACGCAGCCCGGAUUCUGUGGGAGCUGCGCCGUUCUUUCUAUCCGUAGCACCACAUGAUUCGGCUUCGUGGUGCAGGGCAUCAUCCUGUUGGCUGA
Get precursor sequence
Structure
        10          20        30        40        50        60
UUGACAAAUGUCAUUCG--|   UC     C    C     C     GA      CCGUUC 
                   CCUG  CUACG AGCC GGAUU UGUGG  GCUGCG      U
                   GGAC  GGUGC UCGG CUUAG ACACC  CGAUGC      U
AGUCGGUUGUCCUACUACG^   GU     U    -     U     A-      CUAUCU 
.       110       100        90         80         70
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe
Star sequence

Dan-Mir-29-P2g_5p*
mirBase accessionNone
Sequence 
0- GCCCGGAUUCUGUGGGAGCUGCG -23
Get sequence
Mature sequence

Dan-Mir-29-P2g_3p
mirBase accessionNone
Sequence 
39- UAGCACCACAUGAUUCGGCUU -60
Get sequence