MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-29-P2h

Family name MIR-29 (all species)
Seed AGCACCA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues Dan-Mir-29-P1  Dan-Mir-29-P2g 
Orthologues Aae-Mir-29-P2h  Aga-Mir-29-P2h  Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2h  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dme-Mir-29-P2h  Dmo-Mir-29-P2h  Dpu-Mir-29-P2  Dsi-Mir-29-P2h  Dya-Mir-29-P2h  Eba-Mir-29-P2  Esc-Mir-29-P2  Gpa-Mir-29-P2h  Gsp-Mir-29  Hme-Mir-29-P2h  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  Tca-Mir-29-P2h  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)		 scaffold_13340: 5676226-5676342 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUCUCCUCUCGUGUCAAAUUCAUUUUGGAACUGAAUUCUCGUGGGUCUGCACUGACAACACUGACCUGCUGCUGCUGCUGCUCUCCAGUUUGGCCAAUUUUGUUAAUUUUGAAAUUGAAAUUUUGUAGCACCAUGAGAUUCAGCUCUGGCGUGAAUUUCAAACAUGCAUCCACCAA
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Structure
        10          20        30        40        50        60        70        80        
CGUCUCCUCUCGUGUCA--|      U UG  A      U       GU     CUGACAACACUGACCUGCUGCUGCUGCUGCUCUCC 
                   AAUUCAU U  GA CUGAAU CUCGUGG  CUGCA                                   A
                   UUAAGUG G  CU GACUUA GAGUACC  GAUGU                                   G
AACCACCUACGUACAAACU^      C GU  C      -       AC     UUUAAAGUUAAAGUUUUAAUUGUUUUAACCGGUUU 
     170       160       150       140        130       120       110       100        90
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe
Star sequence

Dan-Mir-29-P2h_5p*
mirBase accessionNone
Sequence 
0- ACUGAAUUCUCGUGGGUCUGCA -22
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Mature sequence

Dan-Mir-29-P2h_3p
mirBase accessionNone
Sequence 
96- UAGCACCAUGAGAUUCAGCUC -117
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