| MirGeneDB ID | Tca-Mir-29-P2g |
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| Family name |
MIR-29 (all species) |
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| Seed |
AGCACCA |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-995
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| Paralogues |
Tca-Mir-29-P1
Tca-Mir-29-P2h
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| Orthologues |
Agr-Mir-29-P2
Asu-Mir-29-P2
Bfl-Mir-29-P2
Bge-Mir-29-P2g
Bla-Mir-29-P2
Cbr-Mir-29-P2
Cel-Mir-29-P2
Cte-Mir-29-P2
Dan-Mir-29-P2g
Dgr-Mir-29-P2
Dma-Mir-29-P2
Dme-Mir-29-P2g
Dmo-Mir-29-P2g
Dpu-Mir-29-P2
Dsi-Mir-29-P2g
Dya-Mir-29-P2g
Eba-Mir-29-P2
Esc-Mir-29-P2
Gpa-Mir-29-P2g
Gsp-Mir-29
Hru-Mir-29-P2
Lgi-Mir-29-P2
Lhy-Mir-29-P2
Llo-Mir-29-P2
Mgi-Mir-29-P2
Mom-Mir-29-P2
Npo-Mir-29-P2
Obi-Mir-29-P2
Ofu-Mir-29-P2
Ovu-Mir-29-P2
Pau-Mir-29-P2
Pcr-Mir-29-P2
Pdu-Mir-29-P2
Pfl-Mir-29-P2
Pmi-Mir-29-P2
Pve-Mir-29-P2
Rph-Mir-29-P2
Sko-Mir-29-P2
Sme-Mir-29-o2
Spu-Mir-29-P2
War-Mir-29-P2
Xbo-Mir-29-P2
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| Node of Origin (locus) |
Neoptera
|
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| Node of Origin (family) |
Bilateria
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Genome context
(Tcas5.2) |
LG10: 5002382-5002440 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCUAACGCUACUAAUUUAGCAGAACUCUGAGCUGAAUCUUGAGGUGCUUCCGUGGUUUGGGCUCGUAGCACCACAUGAUUCAGCUUACGUUUCCGCUAACUACCAUCGCAUCUUGAAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCUAACGCUACUAAUU---| A CUC U A UC UGGUU
UAGC GAA UGAGCUGAAUC UG GGUGCU CG \
AUCG CUU AUUCGACUUAG AC CCACGA GC U
CAAGUUCUACGCUACCAUCA^ C UGC U A U- UCGGG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Star sequence |
Tca-Mir-29-P2g_5p* |
| mirBase accession | MIMAT0018628 |
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| Sequence |
0- AGCUGAAUCUUGAGGUGCUUCCG -23
Get sequence
|
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| Mature sequence |
Tca-Mir-29-P2g_3p |
| mirBase accession | MIMAT0018629 |
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| Sequence |
36- UAGCACCACAUGAUUCAGCUUAC -59
Get sequence
|
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