MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-36-P17

Family name MIR-36 (all species)
Seed CACCGGG
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-36-P16  Bpl-Mir-36-P18 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o17  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) B. plicatilis
Node of Origin (family) Protostomia
Genome context
(Bpl_ASM1027981)		 QEOQ01000180.1: 141460-141519 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUCAAUGCCUCUAUGCUUAUGCUCAGCUGGUGAGGUGACACGCGGCAGAUAUAGCUCACAACAUAUCACCGGGUAACACACUCACCUUUCGAGUACAAUUGUUCACAUCUAUGUCUGU
Get precursor sequence
Structure
        10        20          30         40        50         
AGCUCAAUGCCUCUAUGCUUA--     AGCU      -|  AC  G   CA    UAGCU 
                       UGCUC    GGUGAG GUG  AC CGG  GAUA     C
                       AUGAG    CCACUC CAC  UG GCC  CUAU     A
UGUCUGUAUCUACACUUGUUAAC     CUUU      A^  AA  G   A-    ACAAC 
.       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bpl-Mir-36-P17_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUGAGGUGACACGCGGCAGAUA -23
Get sequence
Mature sequence

Bpl-Mir-36-P17_3p
mirBase accessionNone
Sequence 
37- UCACCGGGUAACACACUCACCUU -60
Get sequence