MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-582-v2

Family name MIR-582 (all species)
Seed AACCAGU
Species Cow (Bos taurus)
MiRBase ID bta-mir-582
Paralogues Bta-Mir-582-v1 
Orthologues Cfa-Mir-582-v2  Cja-Mir-582  Cpo-Mir-582-v2  Dno-Mir-582-v2  Eca-Mir-582  Hsa-Mir-582-v2  Laf-Mir-582-v2  Mml-Mir-582-v2  Mmr-Mir-582-v2  Mmu-Mir-582-v2  Ocu-Mir-582  Pab-Mir-582-v2  Rno-Mir-582-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037347.1: 19584398-19584455 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-582-v2)
Mir-582-v1 NC_037347.1: 19584397-19584456 [+] UCSC Ensembl
Mir-582-v2 NC_037347.1: 19584398-19584455 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUCAACACUUCAAUCUGUUCUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUACCUAAUUGUAACCAGUUGAACAACUGAACCCAAAGGGUGCAAAGUGAAAACAUUUCUUUG
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Structure
        10          20        30        40        50        
ACCUCAACACUUCAAUC--|  U        UUA            CA     UAAUCU 
                   UGU CUCUUUGG   CAGUUGUUCAAC  GUUAC      A
                   ACG GGGAAACC   GUCAACAAGUUG  CAAUG      C
GUUUCUUUACAAAAGUGAA^  U        CAA            AC     UUAAUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-582-v2_5p*

mirBase accessionMIMAT0009351
Sequence
0- UACAGUUGUUCAACCAGUUACU -22
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Proposed targets TargetScanVert: bta-miR-582
Mature sequence

Bta-Mir-582-v2_3p

mirBase accessionNone
Sequence
36- UAACCAGUUGAACAACUGAACC -58
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